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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPL49, Mitochondrial ribosomal protein L49
Sequence ID:NM_004927
Entrez Gene ID:740
Ensembl ID:ENSG00000149792

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64889811 - 64894843

NM_004927 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11696488972764889895
1703206489197364892123
3214456489295964893083
44620896489319764894840

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3638801Full LengthBC004378mitochondrial ribosomal protein L49

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004918  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004927 NP_004918 Q13405 Img2

Related Sequences

 
mRNAGenPeptSwissProt
U39400 AAB18826 Q13405
BC004378 AAH04378 Q13405
AB062395 BAB93482 Q13405
AB209160 BAD92397 Q59GE9
AK311821 BAG34763 Q13405

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL49 NP_004918 R.norvegicus Mrpl49 309176   NP_001041348 84
M.musculus Mrpl49 18120 Gene Info NP_080522 83
D.melanogaster mRpL49 32242   NP_572839 42
A.gambiae AgaP_AGAP002713 1273255   XP_312214 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)