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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CERS2, ceramide synthase 2
Sequence ID:NM_022075
NM_181746
NM_013384
Entrez Gene ID:29956
Ensembl ID:ENSG00000143418

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 150937736 - 150947208

 Exon Info From UCSC:
NM_022075
NM_181746

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051086Full LengthBC001357LAG1 homolog, ceramide synthase 2
3506408Full LengthBC010032LAG1 homolog, ceramide synthase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071358  NP_859530  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022075 NP_071358 Q96G23 LAG1
NM_181746 NP_859530 Q96G23 LAG1

Related Sequences

 
mRNAGenPeptSwissProt
AF189062 AAF01058 Q96G23
AF177338 AAG17982 Q96G23
BC001357 AAH01357 Q96G23
BC010032 AAH10032 Q96G23
AY091458 AAM12028 Q96G23
EU446492 ABZ92021  
AK001105 BAA91505 Q5SZE6
Q96G23
AK290989 BAF83678 A8K4M4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CERS2 NP_071358 M.musculus Lass2 76893 Gene Info NP_084065 92
R.norvegicus Cers2 310667   NP_001028872 92
A.thaliana LAG13 837919   NP_001031037 40
A.thaliana LAG1 822140   NP_566769 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)