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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NFYC, nuclear transcription factor Y, gamma
Sequence ID:NM_001142587
NM_001142588
NM_001142589
NM_001142590
NM_014223
Entrez Gene ID:4802
Ensembl ID:ENSG00000066136

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 41157414 - 41237273

 Exon Info From UCSC:
NM_001142587
NM_001142588
NM_001142589
NM_001142590
NM_014223

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3502903Full LengthBC005003nuclear transcription factor Y, gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055038  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142587 NP_001136059    
NM_001142588 NP_001136060    
NM_001142589 NP_001136061    
NM_001142590 NP_001136062    
NM_014223 NP_055038   Histone
CBFD_NFYB_HMF

Related Sequences

 
mRNAGenPeptSwissProt
U62296 AAC50816 Q13952
U78774 AAC51669 Q13952
AF191744 AAG28389 Q13952
BC005003 AAH05003 Q13952
BT020081 AAV38884 Q13952
D85425 BAA12818 Q13952
D89986 BAA14051 Q13952
AK000346 BAA91100 Q13952
AB208975 BAD92212 Q59GY4
AK127677 BAG54549 Q13952
AK300774 BAG62438 Q13952
AK301215 BAG62790 B4DVS8
AK301385 BAG62925 Q13952
Z70024 CAA93846 Q14497
Z74792 CAA99055 Q13952
AL713771 CAD28533 Q8TCN9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NFYC NP_001136060 M.musculus Nfyc 18046 Gene Info NP_001041633 99
R.norvegicus Nfyc 25337   NP_036998 99
A.gambiae AgaP_AGAP000441 1271801   XP_310655 53
D.melanogaster Nf-YC 31622   NP_572354 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta