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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ST13, suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
Sequence ID:NM_003932
Entrez Gene ID:6767
Ensembl ID:ENSG00000100380

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 41220600 - 41222391

 Exon Info From UCSC:
NM_003932

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4536907Full LengthBC071629suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
6046993Full LengthBC052982suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
40031942Full LengthBC139724suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
40031944Full LengthBC107148suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
40120334IncompleteBC121107suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
40120335IncompleteBC121108suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003923  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003932 NP_003923 P50502 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
U28918 AAB38382 P50502
U17714 AAC97526 P50502
AF116650 AAF71070 Q9P1I4
BC015317 AAH15317 Q9P1I4
BC052982 AAH52982 P50502
BC071629 AAH71629 P50502
BC107148 AAI07149 Q3KNR6
BC121107 AAI21108 Q0IJ56
BC121108 AAI21109 Q0IJ56
BC139724 AAI39725 P50502
AY513286 AAT08039 P50502
AY826824 AAX18644 Q1XBU7
AY826825 AAX18645 Q1XBU6
AK303530 BAG64558 B4E0U6
AK316155 BAH14526 B7ZA40
CR456586 CAG30472 P50502
CU013186 CAK54617  
CU013474 CAK54916  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ST13 NP_003923 M.musculus St13 70356 Gene Info NP_598487 95
R.norvegicus St13 81800   NP_112384 92
A.thaliana HIP1 828363   NP_567663 52
C.elegans T12D8.8 176794   NP_499811 50
A.gambiae AgaP_AGAP009119 1280071   XP_319871 49
D.melanogaster HIP 318211   NP_570074 48
D.melanogaster HIP-R 31335   NP_726886 48
P.falciparum PFE1370w 813090   XP_001351831 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)