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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYNC, syncoilin, intermediate filament protein
Sequence ID:NM_001161708
NM_030786
RefSeqGene ID:NG_012421
Entrez Gene ID:81493
Ensembl ID:ENSG00000162520

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 33145975 - 33160873

 Exon Info From UCSC:
NM_001161708
NM_030786

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161708 NP_001155180    
NM_030786 NP_110413 Q9H7C4  

Related Sequences

 
mRNAGenPeptSwissProt
BC119700 AAI19701 Q9H7C4
BC119701 AAI19702 Q9H7C4
AK024707 BAB14970 Q9H7C4
AK297958 BAG60270 Q9H7C4
AK302275 BAG63620 Q9H7C4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYNC NP_110413 R.norvegicus Sync 362606   NP_001102153 79
M.musculus Sync 68828 Gene Info NP_075974 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)