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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IPO5, importin 5
Sequence ID:NM_002271
Entrez Gene ID:3843
Ensembl ID:ENSG00000065150

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q32.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 98674416 - 98676536

 Exon Info From UCSC:
NM_002271

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823581Full LengthBC001497importin 5
5298410Full LengthBC045640importin 5
2823581IncompleteBC019309importin 5
3450586IncompleteBC000947importin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002262  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002271 NP_002262   HEAT
HEAT_PBS

Related Sequences

 
mRNAGenPeptSwissProt
U72761 AAC51317 O00410
BC000947 AAH00947 Q9BVS9
BC001497 AAH01497 O00410
BC019309 AAH19309 O00410
BC045640 AAH45640 O00410
DQ893033 ABM83959  
EU176755 ABW03556  
AK125031 BAG54128 B3KWG6
AK302812 BAG64012 O00410
AK303494 BAG64528 B4E0R6
Y08890 CAA70103 O00410

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IPO5 NP_002262 R.norvegicus Ipo5 306182   XP_224534 99
M.musculus Ipo5 70572 Gene Info NP_076068 98
A.gambiae AgaP_AGAP003769 1271502   XP_310308 53
D.melanogaster Karybeta3 40581   NP_524226 52
A.thaliana emb2734 832102   NP_197483 39
S.pombe sal3 2539387   NP_588502 37
C.elegans imb-3 3565440   NP_490715 37
N.crassa NCU02357 3875925   XP_959778 37
S.cerevisiae PSE1 855356   NP_014039 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)