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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DEFA6, defensin, alpha 6, Paneth cell-specific
Sequence ID:NM_001926
Entrez Gene ID:1671
Ensembl ID:ENSG00000164822

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 6782271 - 6783598

NM_001926 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1324167822206782448
24247567833646783597

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262522Full LengthBC069667defensin, alpha 6, Paneth cell-specific
7262534Full LengthBC069710defensin, alpha 6, Paneth cell-specific
7262546Full LengthBC069728defensin, alpha 6, Paneth cell-specific
7262558Full LengthBC069769defensin, alpha 6, Paneth cell-specific
7939796Full LengthBC093951defensin, alpha 6, Paneth cell-specific
7939798Full LengthBC093953defensin, alpha 6, Paneth cell-specific

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001917  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001926 NP_001917 Q6EZF9
Q01524
Defensin_1
Defensin_propep

Related Sequences

 
mRNAGenPeptSwissProt
M98331 AAB59357 Q6EZF9
Q01524
BC069667 AAH69667 Q6EZF9
Q01524
BC069710 AAH69710 Q6EZF9
Q01524
BC069728 AAH69728 Q6EZF9
Q01524
BC069769 AAH69769 Q6EZF9
Q01524
BC093951 AAH93951 Q6EZF9
Q01524
BC093953 AAH93953 Q6EZF9
Q01524
HQ448454 ADQ32934  

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)