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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SCN8A, Sodium channel, voltage gated, type VIII, alpha subunit
Sequence ID:AY510083
RefSeqGene ID:NG_021180
Entrez Gene ID:6334
Ensembl ID:ENSG00000196876

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 51984049 - 52056604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9094452IncompleteBC172876sodium channel, voltage gated, type VIII, alpha
9094482IncompleteBC172906sodium channel, voltage gated, type VIII, alpha

Protein Infomation

NM_001177984 NP_001171455    
NM_014191 NP_055006 Q9UQD0 Ion_trans

Related Sequences

AF225988 AAF35390 Q9UQD0
AY510083 AAS89692  
AY682081 AAT85830 Q6B4S4
AY682082 AAT85831 Q6B4S3
AY682083 AAT85832 Q6B4S2
FJ611941 ACM63162 Q9UQD0
AB027567 BAA78033 Q9UQD0
AK091315 BAC03635 Q8NBA4
AJ276141 CAC03584 Q9GZR0
AJ276142 CAC03585 Q9GZR0
AJ277395 CAC03587 Q9GZR0
AJ310884 CAC84527 Q9GZR0
AJ310885 CAC84528 Q9GZR0
AJ310898 CAC84538 Q8WWN3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SCN8A NP_055006 M.musculus Scn8a 20273 Gene Info NP_035453 99
R.norvegicus Scn8a 29710   NP_062139 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)