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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HAVCR2, Hepatitis A virus cellular receptor 2
Sequence ID:NM_032782
RefSeqGene ID:NG_030444
Entrez Gene ID:84868
Ensembl ID:ENSG00000135077

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 156512842 - 156536119

NM_032782 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
191481156512842156514304
14821518156515951156515987
15191672156522316156522469
16731716156525868156525911
17171800156531676156531759
18012136156533637156533972
21372338156535936156536137

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5229539Full LengthBC063431hepatitis A virus cellular receptor 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032782 NP_116171 Q8TDQ0  

Related Sequences

 
mRNAGenPeptSwissProt
BC020843 AAH20843 Q8TDQ0
BC063431 AAH63431 Q8TDQ0
AY069944 AAL55401 Q8TDQ0
AF450242 AAL65157  
AF450243 AAL65158 Q8TDQ0
AF251707 AAM19100 Q8TDQ0
HQ448118 ADQ32599  
JX049979 AFO66593  
AK027334 BAB55044 Q8TDQ0
AK314406 BAG37029 Q8TDQ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HAVCR2 NP_116171 R.norvegicus Havcr2 363578   NP_001094232 68
M.musculus Havcr2 171285 Gene Info NP_599011 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)