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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TAF3, TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
Sequence ID:NM_031923
Entrez Gene ID:83860
Ensembl ID:ENSG00000165632

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10p15.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 8058215 - 8060592

NM_031923 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116678606727860837
16740978662807866522
410223280058828007704
2233231580192038019285
2316256880510408051292
2569267580556938055799
2676278980565998056712

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069060Full LengthBC172366TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
3547166IncompleteBC017320TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
3603859IncompleteBC045106TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
3617768IncompleteBC062352TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
4368368IncompleteBC073884TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
4658598IncompleteBC105593TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
5216404IncompleteBC028077TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031923 NP_114129 Q5VWG9  

Related Sequences

 
mRNAGenPeptSwissProt
BC017320 AAH17320 Q5VWG9
BC045106 AAH45106 Q5VWG9
BC062352 AAH62352 Q5VWG9
BC073884 AAH73884 Q5VWG9
BC105593 AAI05594 Q0VGM1
BC172366 AAI72366 Q5VWG9
AL117661 CAB56032 Q5VWG9
AJ292190 CAC34475 Q5VWG9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF3 NP_114129 R.norvegicus LOC100360100 100360100   XP_002728538 87
M.musculus Taf3 209361 Gene Info NP_082024 86
C.elegans PHD-finger 3565673   NP_510658 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)