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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SRRD, SRR1 domain containing
Sequence ID:NM_001013694
Entrez Gene ID:402055
Ensembl ID:ENSG00000100104

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 26879848 - 26888037

NM_001013694 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12162687984926880064
2172572688198826882028
2585172688399426884253
5186162688435526884453
6177712688600926886163
7728172688699026887035
81812922688742826887902

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4820477Full LengthBC066962SRR1 domain containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013716  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001013694 NP_001013716 Q9UH36 SRR1

Related Sequences

 
mRNAGenPeptSwissProt
U63541 AAF77225 Q9NNX4
BC066962 AAH66962 Q9UH36
AK293916 BAG57298 B4DF37

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRRD NP_001013716 M.musculus Srrd 70118 Gene Info NP_081599 71
R.norvegicus Srrd 288717   XP_213799 71
A.gambiae AgaP_AGAP002668 1273292   XP_312256 36
D.melanogaster CG7988 42180   NP_650691 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)