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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPTBN5, spectrin, beta, non-erythrocytic 5
Sequence ID:NM_016642
Entrez Gene ID:51332
Ensembl ID:ENSG00000137877

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 42140344 - 42186275

 Exon Info From UCSC:
NM_016642

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057726  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016642 NP_057726 Q9NRC6 PH
CH
Spectrin

Related Sequences

 
mRNAGenPeptSwissProt
AF233523 AAF65317 Q9NRC6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPTBN5 NP_057726 M.musculus Spnb5 640524 Gene Info XP_001481379 65
R.norvegicus Sptbn5 296090   XP_238278 65
D.melanogaster kst 38418   NP_001097492 33
A.gambiae AgaP_AGAP004440 1274583   XP_313728 31
C.elegans sma-1 179629   NP_741632 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)