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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SOX7, SRY (sex determining region Y)-box 7
Sequence ID:NM_031439
Entrez Gene ID:83595
Ensembl ID:ENSG00000171056

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 10583247 - 10587943

NM_031439 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
529021058127810584175
290332191058770510588021

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6459570Full LengthBC071947SRY (sex determining region Y)-box 7
3622936IncompleteBC004299SRY (sex determining region Y)-box 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113627  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031439 NP_113627 Q9BT81 HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
BC071947 AAH71947 Q9BT81
BT006693 AAP35339 Q9BT81
AK055556 BAB70955 Q9BT81
AK223574 BAD97294 Q53ER5
AJ409320 CAC84226 Q9BT81

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SOX7 NP_113627 M.musculus Sox7 20680 Gene Info NP_035576 89
R.norvegicus Sox7 290317   NP_001099515 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)