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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ANKRD39, ankyrin repeat domain 39
Sequence ID:NM_016466
Entrez Gene ID:51239
Ensembl ID:ENSG00000213337

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 97513776 - 97523726

NM_016466 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
244749751373097514180
4756789751913797519340
6797829752007497520177
7839149752362497523755

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5284947Full LengthBC031303ankyrin repeat domain 39

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016466 NP_057550 Q53RE8 Ank

Related Sequences

 
mRNAGenPeptSwissProt
AF151034 AAF36120 Q53RE8
BC031303 AAH31303 Q53RE8
HQ447968 ADQ32451  
AK312193 BAG35126 B2R5H9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ANKRD39 NP_057550 M.musculus Ankrd39 109346 Gene Info NP_080517 90
R.norvegicus Ankrd39 367251   NP_001128486 89
A.gambiae AgaP_AGAP009205 1280166   XP_319982 48
D.melanogaster CG31919 326173   NP_001033874 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)