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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHYHD1, phytanoyl-CoA dioxygenase domain containing 1
Sequence ID:NM_001100876
NM_001100877
NM_174933
Entrez Gene ID:254295
Ensembl ID:ENSG00000175287

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 131683464 - 131704316

 Exon Info From UCSC:
NM_001100876
NM_001100877
NM_174933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4121964Full LengthBC009373phytanoyl-CoA dioxygenase domain containing 1
4843267Full LengthBC051300phytanoyl-CoA dioxygenase domain containing 1
5209351Full LengthBC053853phytanoyl-CoA dioxygenase domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_777593  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100876 NP_001094346 Q5SRE7  
NM_001100877 NP_001094347    
NM_174933 NP_777593   PhyH

Related Sequences

 
mRNAGenPeptSwissProt
BC009373 AAH09373 Q5SRE7
BC051300 AAH51300 Q5SRE7
BC053853 AAH53853 Q5SRE7
HQ448072 ADQ32553  
AK054994 BAG51448 B3KNT6
AK095000 BAG52969 Q5SRE7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHYHD1 NP_001094346 R.norvegicus Phyhd1 296621   NP_001013099 88
M.musculus Phyhd1 227696 Gene Info NP_758471 86
C.elegans Y105C5B.9 178445   NP_502898 49
A.gambiae AgaP_AGAP003514 1274172   XP_313252 48
A.gambiae AgaP_AGAP012746 1268597   XP_307158 47
D.melanogaster CG14688 41275   NP_001097740 47
N.crassa NCU04228 3876999   XP_960852 46
A.thaliana AT2G01490 814677   NP_565262 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)