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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KDM4C, lysine (K)-specific demethylase 4C
Sequence ID:NM_001146694
NM_001146695
NM_001146696
NM_015061
Entrez Gene ID:23081
Ensembl ID:ENSG00000107077

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 6758060 - 7170917

 Exon Info From UCSC:
NM_001146694
NM_001146695
NM_001146696
NM_015061

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143862Full LengthBC104859jumonji domain containing 2C
8143864Full LengthBC104861jumonji domain containing 2C
9052082Full LengthBC143571jumonji domain containing 2C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055876  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146694 NP_001140166    
NM_001146695 NP_001140167    
NM_001146696 NP_001140168    
NM_015061 NP_055876 Q9H3R0 JmjC
JmjN

Related Sequences

 
mRNAGenPeptSwissProt
BC104859 AAI04860 Q9H3R0
BC104861 AAI04862 Q9H3R0
BC143571 AAI43572 Q9H3R0
AB018323 BAA34500 Q9H3R0
AB037901 BAB16102 Q9H3R0
AK303651 BAG64654 B4E142
AK304032 BAG64946 B4E1Y4
AK304095 BAG65001 B4E239
AK296401 BAH12342 B7Z3V6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDM4C NP_055876 M.musculus Kdm4c 76804 Gene Info NP_001165566 85
R.norvegicus Kdm4c 298144   XP_216426 85
A.gambiae AgaP_AGAP011180 1270747   XP_309467 67
D.melanogaster seq 3772396   NP_001163137 57
D.melanogaster Kdm4B 318918   NP_001163139 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)