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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SARS2, seryl-tRNA synthetase 2, mitochondrial
Sequence ID:NM_001145901
NM_017827
RefSeqGene ID:NG_031865
Entrez Gene ID:54938
Ensembl ID:ENSG00000104835

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 39405906 - 39421536

 Exon Info From UCSC:
NM_001145901
NM_017827

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5478759Full LengthBC042912seryl-tRNA synthetase 2, mitochondrial
3344450IncompleteBC001020seryl-tRNA synthetase 2, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060297  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001145901 NP_001139373      
NM_017827 NP_060297 Q9NP81 EC 6.1.1.11 tRNA-synt_2b

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC001020 AAH01020 Q9NP81 EC 6.1.1.11
BC042912 AAH42912 Q9NP81 EC 6.1.1.11
AK000457 BAA91176 Q9NP81 EC 6.1.1.11
AB029948 BAA99557 Q9NP81 EC 6.1.1.11
AK293414 BAG56921 Q9NP81 EC 6.1.1.11
AK296152 BAG58891 B4DJM9  
AK296170 BAG58908 B4DJP6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SARS2 NP_060297 R.norvegicus Sars2 292759   NP_001099710 87
M.musculus Sars2 71984 Gene Info NP_076126 86
A.gambiae AgaP_AGAP000991 5666837   XP_001688169 47
C.elegans srs-1 177200   NP_500549 43
A.thaliana SRS 837734   NP_172651 41
D.melanogaster Aats-ser 41862   NP_524365 38
S.pombe SPAC25B8.06c 2541567   NP_594466 38
S.cerevisiae DIA4 856402   NP_011875 34
N.crassa NCU09594 3879320   XP_963172 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)