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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFITM2, interferon induced transmembrane protein 2
Sequence ID:NM_006435
Entrez Gene ID:10581
Ensembl ID:ENSG00000185201

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 308162 - 309395

NM_006435 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1332308106308437
333729309012309408

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3876542Full LengthBC009696interferon induced transmembrane protein 2 (1-8D)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006426  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006435 NP_006426 Q01629 CD225

Related Sequences

 
mRNAGenPeptSwissProt
BC009696 AAH09696 Q01629
Q6IBB0
BT009859 AAP88861 Q6IBB0
DQ891667 ABM82593  
DQ894615 ABM85541  
X02490 CAA26321 Q14617
X57351 CAA40625 Q01629
CR456894 CAG33175 Q6IBB0
CR541874 CAG46672 Q01629

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFITM2 NP_006426 R.norvegicus Ifitm2 114709   NP_110460 67
M.musculus Ifitm2 80876 Gene Info NP_109619 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)