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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RHOQ, ras homolog family member Q
Sequence ID:NM_012249
Entrez Gene ID:23433
Ensembl ID:ENSG00000119729

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 46770159 - 46808222

NM_012249 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14614676986646770326
4625204677089246770950
5216854680322546803389
6867814680369946803794
78245404680806646811824

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5539023Full LengthBC056154ras homolog gene family, member Q
6010516Full LengthBC070485ras homolog gene family, member Q
6061807Full LengthBC065291ras homolog gene family, member Q
7939650Full LengthBC093805ras homolog gene family, member Q
8069312Full LengthBC101806ras homolog gene family, member Q
5441133IncompleteBC033251ras homolog gene family, member Q

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036381  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012249 NP_036381 P17081 Ras

Related Sequences

 
mRNAGenPeptSwissProt
M31470 AAA36547 P17081
BC056154 AAH56154 P17081
BC065291 AAH65291 P17081
BC070485 AAH70485 P17081
BC093805 AAH93805 P17081
BC101806 AAI01807 P17081
AF498976 AAM21123 P17081

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RHOQ NP_036381 M.musculus Rhoq 104215 Gene Info NP_663466 100
R.norvegicus Rhoq 85428   NP_445974 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)