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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LY6G5B, lymphocyte antigen 6 complex, locus G5B
Sequence ID:NM_021221
Entrez Gene ID:58496
Ensembl ID:ENSG00000240053

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 31638727 - 31640059

NM_021221 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1583163872731638784
591873163893231639060
1887743163964031640226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014883Full LengthBC146529lymphocyte antigen 6 complex, locus G5B
100069283Full LengthBC172589lymphocyte antigen 6 complex, locus G5B
100014274BC140260lymphocyte antigen 6 complex, locus G5B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021221 NP_067044 Q8NDX9  

Related Sequences

 
mRNAGenPeptSwissProt
BC140260 AAI40261 Q8NDX9
BC146529 AAI46530  
BC172589 AAI72589  
AK289364 BAF82053 Q8NDX9
AJ245417 CAB52191 Q8NDX9
AJ315545 CAC85543 Q8NDX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LY6G5B NP_067044 R.norvegicus Ly6g5b 406867   NP_001001934 64
M.musculus Ly6g5b 266614 Gene Info NP_683741 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)