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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HECTD1, HECT domain containing E3 ubiquitin protein ligase 1
Sequence ID:NM_015382
Entrez Gene ID:25831
Ensembl ID:ENSG00000092148

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 31569323 - 31638676

 Exon Info From UCSC:
NM_015382

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069085Full LengthBC172391HECT domain containing 1
3952406IncompleteBC006237HECT domain containing 1
4122368IncompleteBC011658HECT domain containing 1
4364596IncompleteBC083494HECT domain containing 1
4499318IncompleteBC063686HECT domain containing 1
6046592IncompleteBC072441HECT domain containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015382 NP_056197 Q9ULT8  

Related Sequences

 
mRNAGenPeptSwissProt
BC006237 AAH06237 Q9BRJ0
BC011658 AAH11658 Q9ULT8
BC063686 AAH63686 Q9ULT8
BC083494 AAH83494 Q5XJ19
BC172391 AAI72391 Q9ULT8
AY254380 AAP13073 Q9ULT8
AY739714 AAW65983 Q2KQ74
AB032957 BAA86445 Q9ULT8
AK125788 BAG54248 B3KWT6
AL110222 CAB53681 Q9ULT8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HECTD1 NP_056197 M.musculus Hectd1 207304 Gene Info NP_659037 99
R.norvegicus Hectd1 362736   XP_343061 99
A.gambiae AgaP_AGAP009511 1271399   XP_310184 58
D.melanogaster CG5604 34378   NP_609369 57
C.elegans C34D4.14 177486   NP_501120 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)