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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PMCH, pro-melanin-concentrating hormone
Sequence ID:NM_002674
Entrez Gene ID:5367
Ensembl ID:ENSG00000183395

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 102590239 - 102591611

NM_002674 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3243102590238102590478
244442102590750102590948
443757102591299102591613

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4794545Full LengthBC018048pro-melanin-concentrating hormone

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002665  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002674 NP_002665 P20382 Pro-MCH

Related Sequences

 
mRNAGenPeptSwissProt
M57703 AAA63214 P20382
BC018048 AAH18048 P20382
DQ892335 ABM83261  
DQ895540 ABM86466  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PMCH NP_002665 M.musculus Pmch 110312 Gene Info NP_084247 87
R.norvegicus Pmch 24659   NP_036757 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)