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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB6B, RAB6B, member RAS oncogene family
Sequence ID:NM_016577
Entrez Gene ID:51560
Ensembl ID:ENSG00000154917

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 133543083 - 133553480

NM_016577 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
44618133543081133547695
46194685133553418133553484
46864779133557009133557102
47804891133558349133558460
48924997133560128133560233
49985051133560453133560506
50525110133583427133583485
51115561133614240133614690

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3050592Full LengthBC002510RAB6B, member RAS oncogene family
6450986Full LengthBC078662RAB6B, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057661  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016577 NP_057661 Q6AZ91 Ras

Related Sequences

 
mRNAGenPeptSwissProt
U66623 AAC51198 Q9NRW1
AF091031 AAF00044 Q9UL29
AF166492 AAF61637 Q9NRW1
BC002510 AAH02510 Q9NRW1
BC078662 AAH78662 Q6AZ91
AF498940 AAM21088 Q9NRW1
BT007263 AAP35927 Q9NRW1
EU832725 ACE87057  
AK312378 BAG35296 Q9NRW1
AK295451 BAH12073 B7Z337

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB6B NP_057661 M.musculus Rab6b 270192 Gene Info NP_776142 100
R.norvegicus Rab6b 363123   NP_001102245 100
S.pombe ryh1 2543529   NP_593249 78
C.elegans rab-6.1 176275   NP_498993 77
A.thaliana RAB6A 819069   NP_181989 75
N.crassa NCU05234 3878033   XP_961894 71
S.cerevisiae YPT6 850966   NP_013363 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)