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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT2, Keratin 2
Sequence ID:NM_000423
RefSeqGene ID:NG_008296
Entrez Gene ID:3849
Ensembl ID:ENSG00000172867

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53038571 - 53045948

NM_000423 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
479225303834253039217
9239575303931853039352
95811785304052353040743
117913045304151353041638
130514695304195653042120
147015655304279053042885
156616265304369753043757
162718415304412253044336
184224595304534153045958

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40007308Full LengthBC096294keratin 2
40007309Full LengthBC099643keratin 2
40007310Full LengthBC099644keratin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000414  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000423 NP_000414 P35908 Filament

Related Sequences

 
mRNAGenPeptSwissProt
M99061 AAC83410 P35908
BC096294 AAH96294 P35908
BC099643 AAH99643 P35908
BC099644 AAH99644 P35908

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT2 NP_000414 M.musculus Krt2 16681 Gene Info NP_034798 82
R.norvegicus Krt2 406228   NP_001008899 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)