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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACSM3, acyl-CoA synthetase medium-chain family member 3
Sequence ID:NM_005622
NM_202000
Entrez Gene ID:6296
Ensembl ID:ENSG00000005187

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 20775342 - 20808479

 Exon Info From UCSC:
NM_005622
NM_202000

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3617826Full LengthBC002790acyl-CoA synthetase medium-chain family member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005613  NP_973729  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005622 NP_005613 Q53FZ2 EC 6.2.1.2 AMP-binding
NM_202000 NP_973729     AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002790 AAH02790 Q53FZ2 EC 6.2.1.2
DQ892979 ABM83905    
DQ896227 ABM87226    
EU176405 ABW03856    
D16350 BAA03853 Q53FZ2 EC 6.2.1.2
AK223139 BAD96859 Q53FZ2 EC 6.2.1.2
AK290322 BAF83011 A8K2Q7  
AK296122 BAG58869 B4DJK7  
X80062 CAA56369 Q53FZ2 EC 6.2.1.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACSM3 NP_005613 M.musculus Acsm3 20216 Gene Info NP_997607 87
R.norvegicus Acsm3 24763   NP_150234 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)