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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPCS, phosphopantothenoylcysteine synthetase
Sequence ID:NM_001077447
NM_024664
Entrez Gene ID:79717
Ensembl ID:ENSG00000127125

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 42922229 - 42926085

 Exon Info From UCSC:
NM_001077447
NM_024664

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3913530Full LengthBC106064phosphopantothenoylcysteine synthetase
8143941Full LengthBC104938phosphopantothenoylcysteine synthetase
8327483Full LengthBC112015phosphopantothenoylcysteine synthetase
5213308IncompleteBC062586phosphopantothenoylcysteine synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078940  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001077447 NP_001070915      
NM_024664 NP_078940 Q9HAB8 EC 6.3.2.5 DFP

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC104938 AAI04939 Q9HAB8 EC 6.3.2.5
BC106064 AAI06065 Q9HAB8 EC 6.3.2.5
BC112015 AAI12016 Q9HAB8 EC 6.3.2.5
AK021900 BAB13931 Q9HAB8 EC 6.3.2.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPCS NP_078940 R.norvegicus Ppcs 298490   NP_001034099 88
M.musculus Ppcs 106564 Gene Info NP_080770 87
N.crassa NCU09090 3881058   XP_964907 49
A.thaliana AT5G02080 831921   NP_195828 48
A.gambiae AgaP_AGAP004311 1274457   XP_313585 45
C.elegans Y71H2AM.6 175394   NP_497616 45
A.thaliana COAB 837789   NP_563904 45
S.pombe SPCC4B3.18 2539367   NP_588072 44
S.cerevisiae CAB2 854726   NP_012183 43
D.melanogaster Ppcs 42295   NP_732401 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)