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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST2H3A, histone cluster 2, H3a
Sequence ID:NM_001005464
Entrez Gene ID:333932
Ensembl ID:ENSG00000203852

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 149812276 - 149812757

NM_001005464 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2507149812259149812764

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915509Full LengthBC074969histone cluster 2, H3a
40146666Full LengthBC130635histone cluster 2, H3a
40146668Full LengthBC130637histone cluster 2, H3a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005464  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005464 NP_001005464 Q71DI3 Histone
NM_021059 NP_066403 Q71DI3 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC074969 AAH74969 Q71DI3
BC130635 AAI30636 Q71DI3
BC130637 AAI30638 Q71DI3
BC148478 AAI48479  
BC153074 AAI53075  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST2H3A NP_001005464 A.gambiae AgaP_AGAP012709 1268523   XP_307081 100
M.musculus Hist1h3c 319148 Gene Info NP_783584 100
M.musculus Hist1h3b 319150 Gene Info NP_835510 100
M.musculus Hist1h3e 319151 Gene Info NP_835512 100
M.musculus Hist1h3f 260423 Gene Info NP_038576 100
M.musculus Hist2h3c2 97114 Gene Info NP_473386 100
M.musculus Hist1h3d 319149 Gene Info NP_835511 100
H.sapiens HIST2H3D 653604 Gene Info NP_001116847 100
M.musculus Hist2h3b 319154 Gene Info NP_835587 100
M.musculus Hist2h3c1 15077 Gene Info NP_835734 100
H.sapiens HIST2H3C 126961 Gene Info NP_066403 100
R.norvegicus Hist2h3c 679950   XP_001055051 100
R.norvegicus Hist2h3c2 310678   NP_001101168 100
R.norvegicus Hist1h3f 364716   XP_002728541 100
C.elegans his-55 186250   NP_502138 97
C.elegans his-27 246024   NP_505292 97
C.elegans his-9 175030   NP_496894 97
C.elegans his-6 191668   NP_505199 97
C.elegans his-17 191673   NP_505297 97
C.elegans his-49 184113   NP_505276 97
C.elegans his-25 175031   NP_496895 97
C.elegans his-13 191672   NP_496890 97
C.elegans his-59 186325   NP_501204 97
C.elegans his-45 181821   NP_502134 97
C.elegans his-42 184200   NP_496899 97
C.elegans his-32 177628   NP_501407 97
C.elegans his-2 180074   NP_507033 97
C.elegans his-63 184804   NP_502153 97
A.thaliana HTR11 836660   NP_201338 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)