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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACTG1, actin, gamma 1
Sequence ID:NM_001199954
NM_001614
NR_037688
RefSeqGene ID:NG_011433
Entrez Gene ID:71
Ensembl ID:ENSG00000184009

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
BARAITSER-WINTERSYNDROME 2 
DEAFNESS, AUTOSOMAL DOMINANT 20/26 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 79477250 - 79479825

Transcript StartTranscript EndChromosomal Start Chromosomal End
18617947699879477858
86210437947795279478133
104414827947821379478651
148317227947892879479167
172318517947925779479385
185219197947975979479826

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2819345Full LengthBC000292actin, gamma 1
2820489Full LengthBC001920actin, gamma 1
2962953Full LengthBC007442actin, gamma 1
3865767Full LengthBC053572actin, gamma 1
3939552Full LengthBC009848actin, gamma 1
3940861Full LengthBC010999actin, gamma 1
4554944Full LengthBC012050actin, gamma 1
4842665Full LengthBC015695actin, gamma 1
4855463Full LengthBC015005actin, gamma 1
4856294Full LengthBC015779actin, gamma 1
4869628Full LengthBC018774actin, gamma 1
3538275IncompleteBC017450actin, gamma 1
3897065IncompleteBC009544actin, gamma 1
4053240IncompleteBC010417actin, gamma 1
4109821IncompleteBC023548actin, gamma 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199954 NP_001186883    
NM_001614 NP_001605 P63261 Actin

Related Sequences

 
mRNAGenPeptSwissProt
M16247 AAA51580 P63261
BC000292 AAH00292 P63261
BC001920 AAH01920 P63261
BC004223 AAH04223 Q9BTD2
BC007442 AAH07442 P63261
BC009544 AAH09544 Q96DE1
BC009848 AAH09848 P63261
BC010417 AAH10417 Q96FU6
BC010999 AAH10999 P63261
BC012050 AAH12050 P63261
BC015005 AAH15005 P63261
BC015695 AAH15695 P63261
BC015779 AAH15779 P63261
BC017450 AAH17450 Q8WVW5
BC018774 AAH18774 P63261
BC023548 AAH23548 Q6PJ43
BC053572 AAH53572 P63261
BT019856 AAV38659 P63261
DQ891374 ABM82300  
EU176631 ABW03432  
EU832693 ACE87025  
EU832621 ACE87712  
AK291937 BAF84626 P63261
AK301175 BAG62762 B4DVQ0
AK304637 BAG65416 B4E3A4
X04098 CAA27723 P63261

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACTG1 NP_001186883 M.musculus Actg1 11465 Gene Info NP_033739 100
R.norvegicus Actg1 287876   NP_001120921 100
R.norvegicus LOC100361457 100361457   XP_002729242 100
A.gambiae ACT5C_ANOGA 1272407   XP_001230772 98
D.melanogaster Act5C 31521   NP_001014725 98
C.elegans act-5 176793   NP_499809 94
S.pombe act1 2540051   NP_595618 91
N.crassa NCU04173 3877297   XP_961133 90
S.cerevisiae ACT1 850504   NP_116614 89
A.thaliana ACT2 821411   NP_188508 87
A.thaliana ACT8 841347   NP_175350 87
P.falciparum ACT1 811495   XP_001350847 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta