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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. USP7, ubiquitin specific peptidase 7 (herpes virus-associated)
Sequence ID:NM_003470
Entrez Gene ID:7874
Ensembl ID:ENSG00000187555

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 8988901 - 9050237

 Exon Info From UCSC:
NM_003470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066416Full LengthBC166690ubiquitin specific peptidase 7 (herpes virus-associated)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003461  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003470 NP_003461 Q93009 EC 3.4.19.12 UCH
MATH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC166690 AAI66690    
AY376241 AAQ82908 Q6U8A4  
AK302481 BAH13721 B7Z7T5  
AK302771 BAH13801 B7Z815  
AK302872 BAH13828 B7Z842  
AK302912 BAH13841 B7Z855  
AK316441 BAH14812 B7ZAX6  
Z72499 CAA96580 Q93009 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP7 NP_003461 R.norvegicus Usp7 360471   NP_001019961 99
M.musculus Usp7 252870 Gene Info NP_001003918 99
A.gambiae AgaP_AGAP008530 1277443   XP_316911 53
D.melanogaster Usp7 32169   NP_572779 50
A.thaliana UBP13 820364   NP_001189864 39
A.thaliana UBP12 830548   NP_850783 39
S.pombe ubp21 2541131   NP_595341 38
C.elegans math-33 179538   NP_505825 38
N.crassa NCU03797 3877346   XP_961186 37
S.pombe ubp22 2539385   NP_588211 36
S.cerevisiae UBP15 855350   NP_014033 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)