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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TAL1, T-cell acute lymphocytic leukemia 1
Sequence ID:NM_003189
Entrez Gene ID:6886
Ensembl ID:ENSG00000162367

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 47685064 - 47694995

NM_003189 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1739004768196247685845
390139954768967547689769
399644424769111447691560
444350184769486747695442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063969Full LengthBC160033T-cell acute lymphocytic leukemia 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003180  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003189 NP_003180 P17542 HLH

Related Sequences

 
mRNAGenPeptSwissProt
M29038 AAA36598 P17542
M61108 AAA36600 P17542
S53245 AAB19683 Q16509
BC160033 AAI60033  
X51990 CAA36246 P17542

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAL1 NP_003180 M.musculus Tal1 21349 Gene Info NP_035657 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)