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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PITPNB, Phosphatidylinositol transfer protein, beta
Sequence ID:NM_012399
Entrez Gene ID:23760
Ensembl ID:ENSG00000180957

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 28247657 - 28269803

 Exon Info From UCSC:
NM_012399

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4341137Full LengthBC031427phosphatidylinositol transfer protein, beta
4643509Full LengthBC018704phosphatidylinositol transfer protein, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036531  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012399 NP_036531 P48739 IP_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC018704 AAH18704 P48739
BC031427 AAH31427 P48739
D30037 BAA06277 P48739
AK313064 BAG35893 B2R7P6
AK123384 BAG53898 B3KVT6
AK302367 BAH13686 B7Z7Q0
CR456541 CAG30427 P48739
CU013141 CAK54572  
CU013429 CAK54871  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PITPNB NP_036531 M.musculus Pitpnb 56305 Gene Info NP_062614 98
R.norvegicus Pitpnb 114561   NP_446194 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)