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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPP1CB, protein phosphatase 1, catalytic subunit, beta isozyme
Sequence ID:NM_002709
NM_206876
NM_206877
Entrez Gene ID:5500
Ensembl ID:ENSG00000213639

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 28899686 - 29022794

 Exon Info From UCSC:
NM_002709
NM_206876

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3609386Full LengthBC002697protein phosphatase 1, catalytic subunit, beta isoform
3631338Full LengthBC012045protein phosphatase 1, catalytic subunit, beta isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002700  NP_996759  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002709 NP_002700 P62140 EC 3.1.3.16
EC 3.1.3.53
Metallophos
NM_206876 NP_996759 P62140 EC 3.1.3.16
EC 3.1.3.53
Metallophos

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF092905 AAF01137 P62140 EC 3.1.3.16
EC 3.1.3.53
BC002697 AAH02697 P62140 EC 3.1.3.16
EC 3.1.3.53
BC012045 AAH12045 P62140 EC 3.1.3.16
EC 3.1.3.53
BT019744 AAV38549 P62140 EC 3.1.3.16
EC 3.1.3.53
AK312329 BAG35251 P62140 EC 3.1.3.16
EC 3.1.3.53
AK295957 BAG58737 B4DJ75  
AK303682 BAG64675 B4E163  
AK316532 BAH14903 B7ZB67  
X80910 CAA56870 P62140 EC 3.1.3.16
EC 3.1.3.53
CR542263 CAG47059 P62140 EC 3.1.3.16
EC 3.1.3.53
CR542285 CAG47080 P62140 EC 3.1.3.16
EC 3.1.3.53
AM392772 CAL37650    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP1CB NP_996759 R.norvegicus Ppp1cb 25594   NP_037197 100
M.musculus Ppp1cb 19046 Gene Info NP_766295 100
C.elegans gsp-1 179486   NP_505733 93
D.melanogaster flw 44289   NP_524738 91
A.gambiae AgaP_AGAP003114 1273783   XP_312797 89
A.thaliana TOPP3 842708   NP_176587 75
A.thaliana TOPP7 826726   NP_567375 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)