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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT6A, keratin 6A
Sequence ID:NM_005554
RefSeqGene ID:NG_008298
Entrez Gene ID:3853
Ensembl ID:ENSG00000205420

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PACHYONYCHIA CONGENITA, JADASSOHN-LEWANDOWSKY TYPEKRT16

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 52881468 - 52887041

NM_005554 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
27825288095852881738
7838175288185252881886
81810385288211152882331
103911645288372652883851
116513295288435252884516
133014255288464152884736
142614865288489552884955
148717015288530552885519
170224505288643252887180

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3639270Full LengthBC014152keratin 6A
3947610Full LengthBC008807keratin 6A
5428084Full LengthBC069269keratin 6A
40117015Full LengthBC125058keratin 6A
40117016Full LengthBC139753keratin 6A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005545  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005554 NP_005545 P02538 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC008807 AAH08807 P02538
BC014152 AAH14152 P02538
BC069269 AAH69269 P02538
BC125058 AAI25059 P02538
BC139753 AAI39754 P02538
BT006899 AAP35545 P02538
BT007605 AAP36273  
DQ893788 ABM84714  
DQ890619 ABM92236  
AK290245 BAF82934 A8K2I0
AK299386 BAG61372 B4DRR0
AK299428 BAG61408 B4DRU6
AK301686 BAG63158 B4DWU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT6A NP_005545 M.musculus Krt6a 16687 Gene Info NP_032502 89
M.musculus Krt6b 16688 Gene Info NP_034799 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)