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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SALL3, sal-like 3 (Drosophila)
Sequence ID:NM_171999
RefSeqGene ID:NG_030353
Entrez Gene ID:27164
Ensembl ID:ENSG00000256463

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 76740274 - 76757397

NM_171999 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1827674027476740355
8334717675207376755461
347247727675689076758190

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40114022Full LengthBC148296sal-like 3 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_741996  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_171999 NP_741996 Q9BXA9 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC148296 AAI48297 A9JR48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SALL3 NP_741996 R.norvegicus Sall3 364910   NP_001102362 87
M.musculus Sall3 20689 Gene Info NP_840064 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)