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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DDB2, damage-specific DNA binding protein 2, 48kDa
Sequence ID:NM_000107
RefSeqGene ID:NG_009365
Entrez Gene ID:1643
Ensembl ID:ENSG00000134574

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p12-p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 47236687 - 47260400

NM_000107 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13224723649247236813
3234594723788647238022
4606514723840847238599
6527974725436447254509
7988974725612347256222
89810754725630747256484
107612184725682047256962
121913834725938747259551
138414294725968847259733
143018484726035047260768

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3508134Full LengthBC000093damage-specific DNA binding protein 2, 48kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000098  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000107 NP_000098 Q92466 WD40

Related Sequences

 
mRNAGenPeptSwissProt
U18300 AAB07897 Q92466
BC000093 AAH00093 Q92466
BT007139 AAP35803 Q92466
DQ890719 ABM81645  
HQ447914 ADQ32398  
AB107037 BAD12557 Q92466
AB107038 BAD12558 Q92466
AB107039 BAD12559 Q92466
AB107040 BAD12560 Q92466
AK313262 BAG36072 Q92466

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDB2 NP_000098 R.norvegicus LOC100362121 100362121   XP_002729243 79
M.musculus Ddb2 107986 Gene Info NP_082395 78
A.thaliana DDB2 835990   NP_200684 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)