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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZNF238, Zinc finger protein 238
Sequence ID:NM_006352
NM_205768
Entrez Gene ID:10472
Ensembl ID:ENSG00000179456

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q44-qterMitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 244216581 - 244220778

 Exon Info From UCSC:
NM_006352
NM_205768

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5259205Full LengthBC036677zinc finger protein 238
6181071IncompleteBC078175zinc finger protein 238

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_991331  NP_006343  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006352 NP_006343 Q99592 zf-C2H2
BTB
NM_205768 NP_991331   zf-C2H2
BTB

Related Sequences

 
mRNAGenPeptSwissProt
U38896 AAA81368 Q99592
BC036677 AAH36677 Q99592
AK291408 BAF84097 Q99592
AK293892 BAG57281 B4DF20
AJ001388 CAA04718 Q99592
X95072 CAA64468 Q99592

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZNF238 NP_991331 R.norvegicus Zfp238 64619   NP_073169 99
M.musculus Zfp238 30928 Gene Info NP_001012330 99
A.gambiae AgaP_AGAP005245 1274953   XP_001688538 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)