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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GAR1, GAR1 ribonucleoprotein homolog (yeast)
Sequence ID:NM_018983
NM_032993
Entrez Gene ID:54433
Ensembl ID:ENSG00000109534

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 110736708 - 110745893

 Exon Info From UCSC:
NM_018983
NM_032993

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3451136Full LengthBC003413GAR1 ribonucleoprotein homolog (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061856  NP_127460  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018983 NP_061856 Q9NY12 Gar1
NM_032993 NP_127460 Q9NY12 Gar1

Related Sequences

 
mRNAGenPeptSwissProt
BC003413 AAH03413 Q9NY12
AY780787 AAV98357 Q9NY12
DQ894157 ABM85083  
EU176271 ABW03722  
AJ276003 CAB76563 Q9NY12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GAR1 NP_061856 R.norvegicus Gar1 499709   NP_001019477 98
M.musculus Gar1 68147 Gene Info NP_080854 97
C.elegans Y66H1A.4 176870   NP_499927 70
D.melanogaster CG4038 37397   NP_477043 68
S.pombe gar1 2540705   NP_596365 62
S.cerevisiae GAR1 856489   NP_011957 61
A.thaliana AT3G03920 821062   NP_566217 60
N.crassa NCU07903 3878567   XP_962419 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)