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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPARD, peroxisome proliferator-activated receptor delta
Sequence ID:NM_001171818
NM_001171819
NM_001171820
NM_006238
NM_177435
RefSeqGene ID:NG_012345
Entrez Gene ID:5467
Ensembl ID:ENSG00000112033

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 35310372 - 35391780

 Exon Info From UCSC:
NM_001171818
NM_001171819
NM_001171820
NM_006238
NM_177435

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3139849Full LengthBC007578peroxisome proliferator-activated receptor delta
3630487Full LengthBC002715peroxisome proliferator-activated receptor delta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006229  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171818 NP_001165289    
NM_001171819 NP_001165290    
NM_001171820 NP_001165291    
NM_006238 NP_006229 Q03181 Hormone_recep
zf-C4
NM_177435 NP_803184    

Related Sequences

 
mRNAGenPeptSwissProt
L07592 AAA36469 Q03181
BC002715 AAH02715 Q03181
BC007578 AAH07578 Q03181
AY919140 AAX14041 Q03181
HQ692865 ADZ17376 F1D8S7
AB099507 BAC78903 Q03181
AK291661 BAF84350 Q03181
AK122614 BAG53624 Q03181
AK304482 BAG65293 B4E2Y1
AK304878 BAG65615 B4E3V3
AB307691 BAH02282 Q03181
AK296425 BAH12347 Q03181

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPARD NP_001165289 M.musculus Ppard 19015 Gene Info NP_035275 93
R.norvegicus Ppard 25682   NP_037273 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta