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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBC1D25, TBC1 domain family, member 25
Sequence ID:NM_001006113
NM_002536
Entrez Gene ID:4943
Ensembl ID:ENSG00000068354

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48398185 - 48419363

Transcript StartTranscript EndChromosomal Start Chromosomal End
12344839807448398307
2353444839972048399829
3454994840325648403410
5006274841728448417411
6288164841754548417733
81738124841800148420996

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069323Full LengthBC101817TBC1 domain family, member 25
8069325Full LengthBC101819TBC1 domain family, member 25
40117866Full LengthBC125088TBC1 domain family, member 25
4909678IncompleteBC026050TBC1 domain family, member 25
5398609IncompleteBC036942ornithine aminotransferase-like 1
5808220IncompleteBC064334ornithine aminotransferase-like 1
6292504IncompleteBC082255ornithine aminotransferase-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002527  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002536 NP_002527 Q3MII6 TBC

Related Sequences

 
mRNAGenPeptSwissProt
L08240 AAA59593 Q14830
BC026050 AAH26050 Q3MII6
BC101817 AAI01818 Q3MII6
BC101819 AAI01820 Q3MII6
BC125088 AAI25089 Q3MII6
AK293521 BAG57003 B4DE92
AK293875 BAG57264 B4DF03
AK294776 BAG57904 B4DGU3
AK297924 BAG60241 B4DNH9
AK298884 BAG60997 B4DQN5
AK299561 BAG61504 B4DS42
AK316199 BAH14570 B7ZA84
AB449912 BAH16655 B9A6M7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBC1D25 NP_002527 M.musculus Tbc1d25 209815 Gene Info NP_766066 94
R.norvegicus Tbc1d25 302552   NP_001100425 94
A.gambiae AgaP_AGAP008418 1277559   XP_317029 53
D.melanogaster CG8155 36698   NP_611029 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)