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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IL3, interleukin 3 (colony-stimulating factor, multiple)
Sequence ID:NM_000588
Entrez Gene ID:3562
Ensembl ID:ENSG00000164399

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 131396353 - 131398530

NM_000588 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1215131396346131396560
216257131396659131396700
258347131398004131398093
348389131398218131398259
390924131398361131398895

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6971773Full LengthBC066272interleukin 3 (colony-stimulating factor, multiple)
6971774Full LengthBC066273interleukin 3 (colony-stimulating factor, multiple)
6971775Full LengthBC066274interleukin 3 (colony-stimulating factor, multiple)
6971776Full LengthBC066275interleukin 3 (colony-stimulating factor, multiple)
6971777Full LengthBC066276interleukin 3 (colony-stimulating factor, multiple)
7262122Full LengthBC069472interleukin 3 (colony-stimulating factor, multiple)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000579  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000588 NP_000579 P08700 IL3

Related Sequences

 
mRNAGenPeptSwissProt
M17115 AAA35725 P08700
M14743 AAA59146 P08700
M20137 AAA59147 P08700
BC066272 AAH66272 P08700
BC066273 AAH66273 P08700
BC066274 AAH66274 Q6NZ79
BC066275 AAH66275 Q6NZ78
BC066276 AAH66276 P08700
BC069472 AAH69472 P08700
HQ448457 ADQ32937  

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta