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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TTPA, tocopherol (alpha) transfer protein
Sequence ID:NM_000370
RefSeqGene ID:NG_016123
Entrez Gene ID:7274
Ensembl ID:ENSG00000137561

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ATAXIA WITH ISOLATED VITAMIN E DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 63972367 - 63998598

NM_000370 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
219386397204763973983
193920496397676463976874
205022436397846263978655
224423976398549363985646
239826336399837663998611

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4610804Full LengthBC058000tocopherol (alpha) transfer protein
4593015IncompleteBC041784tocopherol (alpha) transfer protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000361  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000370 NP_000361 P49638 CRAL_TRIO
CRAL_TRIO_N

Related Sequences

 
mRNAGenPeptSwissProt
U21938 AAA64309 P49638
BC058000 AAH58000 P49638
HQ447611 ADQ32097  
D49488 BAA08449 P49638

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TTPA NP_000361 M.musculus Ttpa 50500 Gene Info NP_056582 89
R.norvegicus Ttpa 25571   NP_037180 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)