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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMTNL1, smoothelin-like 1
Sequence ID:NM_001105565
Entrez Gene ID:219537
Ensembl ID:ENSG00000214872

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_001105565 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1525730897857309029
537865731011357310846
7879195731109657311228
9209715731134157311392
97211275731335357313508
112812425731370557313819
124313945731397357314124
139520625731744057318107

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069075Full LengthBC172381smoothelin-like 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001105565 NP_001099035    

Related Sequences

 
mRNAGenPeptSwissProt
BC172381 AAI72381  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMTNL1 NP_001099035 M.musculus Smtnl1 68678 Gene Info NP_077192 71
R.norvegicus Smtnl1 311167   XP_230278 71
A.gambiae AgaP_AGAP000906 1277420   XP_316883 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)