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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARFGAP3, ADP-ribosylation factor GTPase activating protein 3
Sequence ID:NM_014570
NM_001142293
Entrez Gene ID:26286
Ensembl ID:ENSG00000242247

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 43192534 - 43253245

 Exon Info From UCSC:
NM_014570
NM_001142293

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3938853Full LengthBC005122ADP-ribosylation factor GTPase activating protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055385  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142293 NP_001135765    
NM_014570 NP_055385 Q9NP61 ArfGap

Related Sequences

 
mRNAGenPeptSwissProt
AF111847 AAF40310 Q9NP61
BC005122 AAH05122 Q9NP61
DQ893007 ABM83933  
DQ896253 ABM87252  
AK002083 BAA92076 Q9NP61
AK022768 BAB14236 Q9NP61
AK297635 BAH12636 B7Z4Q0
AK300531 BAH13298 B7Z6L2
AL137598 CAB70834 Q9NP61
AL159143 CAB76901 Q9NP61
CR456382 CAG30268 Q9NP61
CU012940 CAK54371  
CU013228 CAK54670  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARFGAP3 NP_055385 M.musculus Arfgap3 66251 Gene Info NP_079721 81
A.thaliana AGD8 827512   NP_567543 42
A.thaliana AGD9 834718   NP_199487 40
N.crassa NCU08811 3878146   XP_961998 35
S.pombe glo3 2541825   NP_594843 32
S.cerevisiae GLO3 856859   NP_011048 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta