Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. COPA, coatomer protein complex, subunit alpha
Sequence ID:NM_001098398
Entrez Gene ID:1314
Ensembl ID:ENSG00000122218

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160294265 - 160295166

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5533230Full LengthBC038447coatomer protein complex, subunit alpha
5285498IncompleteBC037941coatomer protein complex, subunit alpha

Protein Infomation

NM_001098398 NP_001091868    
NM_004371 NP_004362 P53621 WD40

Related Sequences

U24105 AAB70879 P53621
BC038447 AAH38447 P53621

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens COPA NP_001091868 M.musculus Copa 12847 Gene Info NP_034068 98
R.norvegicus Copa 304978   NP_001128012 98
D.melanogaster alphaCop 38199   NP_477395 72
A.gambiae AgaP_AGAP010251 1279675   XP_319442 72
C.elegans Y71F9AL.17 171860   NP_491069 61
A.thaliana AT1G62020 842497   NP_176393 57
A.thaliana AT2G21390 816678   NP_179734 57
N.crassa NCU10066 3874028   XP_957881 51
S.pombe SPBPJ4664.04 2541412   NP_595279 49
S.cerevisiae COP1 851410   NP_010136 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta