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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC10A5, Solute carrier family 10 (sodium/bile acid cotransporter family), member 5
Sequence ID:NM_001010893
Entrez Gene ID:347051
Ensembl ID:ENSG00000253598

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 82605892 - 82608409

NM_001010893 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
313178260589282607206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020615Full LengthBC136625solute carrier family 10 (sodium/bile acid cotransporter family), member 5
9020621Full LengthBC136631solute carrier family 10 (sodium/bile acid cotransporter family), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001010893  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001010893 NP_001010893 Q5PT55 SBF

Related Sequences

 
mRNAGenPeptSwissProt
BC136625 AAI36626 Q5PT55
BC136631 AAI36632 Q5PT55
AY825924 AAV80707 Q5PT55
AK095808 BAG53134 Q5PT55

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC10A5 NP_001010893 M.musculus Slc10a5 241877 Gene Info NP_001010834 74
R.norvegicus Slc10a5 310230   NP_001020451 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)