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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFNE, Interferon, epsilon
Sequence ID:NM_176891
Entrez Gene ID:338376
Ensembl ID:ENSG00000184995

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 21481057 - 21481699

NM_176891 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3015012148084021482311

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40003063Full LengthBC100871interferon, epsilon
40003065Full LengthBC100872interferon, epsilon
40003066Full LengthBC100873interferon, epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_795372  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_176891 NP_795372 Q86WN2 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC100871 AAI00872 Q86WN2
BC100872 AAI00873 Q86WN2
BC100873 AAI00874 Q86WN2
AY190045 AAO38686 Q86WN2
AY358570 AAQ88933 Q86WN2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFNE NP_795372 R.norvegicus RGD1565065 298225   XP_002729545 62
M.musculus Ifne 230405 Gene Info NP_796322 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)