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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GTF2F1, general transcription factor IIF, polypeptide 1, 74kDa
Sequence ID:NM_002096
Entrez Gene ID:2962
Ensembl ID:ENSG00000125651

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6380001 - 6393197

 Exon Info From UCSC:
NM_002096

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3009685Full LengthBC013007general transcription factor IIF, polypeptide 1, 74kDa
3352627Full LengthBC000120general transcription factor IIF, polypeptide 1, 74kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002087  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002096 NP_002087 P35269 TFIIF_alpha

Related Sequences

 
mRNAGenPeptSwissProt
BC000120 AAH00120 P35269
BC013007 AAH13007 P35269
BT007097 AAP35761 P35269
DQ893766 ABM84692  
DQ890597 ABM92214  
AK315240 BAG37667 P35269
AK293124 BAG56676 B4DDB5
AK302178 BAG63544 B4DXY2
X64002 CAA45404 P35269
X64037 CAA45408 P35269
CR456798 CAG33079 Q6IBK5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTF2F1 NP_002087 R.norvegicus Gtf2f1 316123   NP_001007712 93
M.musculus Gtf2f1 98053 Gene Info NP_598562 93
A.gambiae AgaP_AGAP002779 1273190   XP_312144 47
D.melanogaster TfIIFalpha 40790   NP_524246 45
C.elegans C01F1.1 173764   NP_494756 36
A.thaliana RAP74 826874   NP_001154225 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)