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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NGFR, nerve growth factor receptor
Sequence ID:NM_002507
Entrez Gene ID:4804
Ensembl ID:ENSG00000064300

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47571584 - 47575162

NM_002507 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11914757265447572844
1923334757942447579565
3346934758366047584019
6949464758777347588025
94711074758925347589413
110834204759006947592381

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5263715Full LengthBC050309nerve growth factor receptor (TNFR superfamily, member 16)
5478137IncompleteBC052797nerve growth factor receptor (TNFR superfamily, member 16)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002507 NP_002498 P08138 TNFR_c6
Death

Related Sequences

 
mRNAGenPeptSwissProt
M14764 AAB59544 P08138
BC050309 AAH50309 P08138
AK313654 BAG36408 P08138
AK303278 BAG64358 B4E096

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NGFR NP_002498 M.musculus Ngfr 18053 Gene Info NP_150086 93
R.norvegicus Ngfr 24596   NP_036742 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta