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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC9C1, solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
Sequence ID:NM_183061
Entrez Gene ID:285335
Ensembl ID:ENSG00000172139

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 111859733 - 112013105

 Exon Info From UCSC:
NM_183061

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4827529Full LengthBC044801solute carrier family 9, member 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_898884  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_183061 NP_898884 Q4G0N8 cNMP_binding
Ion_trans
Na_H_Exchanger

Related Sequences

 
mRNAGenPeptSwissProt
BC044801 AAH44801 Q4G0N8
AK128084 BAC87265 Q4G0N8
BK001328 DAA01462 Q4G0N8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC9A10 NP_898884 M.musculus Slc9a10 208169 Gene Info NP_932774 70
R.norvegicus Slc9a10 288117   XP_002727953 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)