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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STX19, Syntaxin 19
Sequence ID:NM_001001850
RefSeqGene ID:NG_017076
Entrez Gene ID:415117
Ensembl ID:ENSG00000178750

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 93733214 - 93747454

NM_001001850 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
439549373321493734125
95511989374721093747453

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4746351Full LengthBC034696syntaxin 19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001850  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001850 NP_001001850 Q8N4C7 Syntaxin
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
BC034696 AAH34696 Q8N4C7
AF461456 AAQ04780 Q8N4C7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STX19 NP_001001850 M.musculus Stx19 68159 Gene Info NP_080864 86
R.norvegicus Stx19 685180   NP_001102930 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)